I want to run a screening DOE to ID factors important for yield in a batch process. I have 4 tanks (call them A, B, C, D) to do it in, and want to investigate 5 continuous factors impact on my 1 response. However, I discovered that there is significant variability between the 4 tanks - with 1 tank consistently having significantly lower yield than 1 other tank (highest producing tank), while the other 3 tanks don't show a significant difference between each other.
I cannot vary the order the tanks are run in - the run order will always start with tank A 1st, followed by B, C, & D. I was thinking the most efficient way (the least amount of runs) to account for this variability would be to treat the tanks as a covariate w/ 2 levels (tank A, and all other tanks), but I'm not entirely sure if that's correct. I couldn't do an RCBD - it wouldn't be possible - I don't have enough batches scheduled for this product. Is treating them as a covariate in this context correct - basically I know there's variation w/ this factor, but I'm not really interested in testing it and I cannot randomize which tank gets which treatment?