Hi,
I'm
Jordan
Walters,
I'm
a Technical Intern at JMP
and
I'm
going
to
present
to
you
today
about
Structural Equation Modeling
and
how
we
can
use
this
in
linear
aggression
to
actually
find
relationships
with
otherwise
might
not
already
be
obvious.
So
to
do
this,
we're
going
to
have
a
look
at
a
case
study
about
manufacturing
of
pharmaceutical
tablets.
Within
this
case
study,
there's
lots
of
factors
and
responses
that
need
monitoring
and
we
need
to
try
and
determine
the
relationship
between
these
factors
and
these
responses
to
try
and
work
out
how the
system
works.
And
in
doing
this,
this
is
going
to
allow
us
to
find
the
optimal
conditions
for
our
tablet
to
make
the
best
tablet
possible.
But
to
make
this
entire
case
study
a
lot
simpler,
rather
than
focusing
on
all
of
the
responses
and
all of
the
factors,
we're
just
going
to
focus
on
one
response
and
one
factor.
So
in
this
case,
the
one
factor
we're
looking
at
is
the
percent
composition
of
water
and
the
one
response
that
we're
going
to
look
at
is
the
density
of
the
tablet.
And
that's
going
to
be
the
metric
of
whether
or
not
we
have
the tablet
or
not.
So
just
for
reference,
the
tablet
density
is
in
milligrams
per
centimeter
cubed.
So
typically,
how
we
define
the
relationship
between
this
response
and
factor
is
just
through
a
simple
linear
regression
which
from
the
name,
gives
us
a
linear
relationship
between
the
response
and factor.
And this
is
what
we
need
to
fully
understand
the
system.
But
the
problem
with
linear
regression
is
it's
only
going
to
allow
us
to
find
the
direct
effects between
changing
the water
composition
and
the density
of
the
tablet.
It's
not
going
to
let
us
find
anything
else
about
the
system
or
any
underlying
features.
And
so
because
of
this,
it
might
actually
fail
to
give
an
impression
for the
system.
And
this
is
where
Structural E
quation M
odeling
can
actually
come
in
to
try
and
give
us
a
more
comprehensive
view
of
the
system
which
is
going
to
allow
us
to
find
different
relationships
which
maybe
more
support
and
not need for obvious
.
So
a
bit
of
background
on
linear
regression,
in
its
simplest
form,
linear
regression
is
just
a
linear
relationship
between
one
variable
to
another.
And
since
linear
regression
is
by
definition,
linear,
this
is
going
to
be
connected
by
a
linear
equation.
In this
equation
in
this
case,
is
Y
equals
mX
plus
C.
Well,
Y
is
the
Y
response,
X
is
the
X
factor,
m
is
our
radiant,
and
C
is
our
offset.
So
the
m
and
the
C
are
just
constants
that
we're
going
to
find
to
fill
this
regression
equation
so
that
we
can
relate
on
Y
on X
variables.
So
to
do
this
in
the
context
of
the
case
study,
we're
going
to
plot
the
X
and
Y
variables
to
try
and
come
up
with
this
regression
equation
in
JMP.
And
JMP
can
very
simply
do
this for us.
It
gives
us
a
lot
of
information,
some
of
which
we
don't
need
for
performing
this
linear
regression.
But
the
two
pieces
of
really
important
information
that
we
get
is
the
regression
coefficients
which
is
our
m
and
our
C,
which
are
about here,
and
the
regression
equation
which
is
the
full
form
of
our
linear
regression.
Now JMP
does
give
this
to
us
in
the
form
of
Y
equals
mX
plus
C
but
for
the
purposes
of
clarity,
and
to
see
how
this
works
in our
case
study
is
presented
here
as
a
proper
relationship
being
that
the
density
is
equal
to
0.11
7 percent
of
water
plus
95.
903.
And
this
is
reported
above
with
your
m
and
C
values.
Well,
you
might
simply
see
that
all
this
relationship
means
is
that
for
every
one
unit
increase
in
percentage
to
L,
we
get
a
one
unit
increase
in
density.
But
we
have
that
C
value
at
the
end
which
offsets
our
density
by
95
.93.
The
purposes
of
the
C
value
is
to
give
a
scale
to
our
data.
Without
that
scale,
what
we
have
is
a
relationship
between
density
and
percent
of composition
of H_2O.
Adding
this
constant
at
the
end
gives
us
that
scale
to
actually
be
the
units
that
we
need
to study within
this
case
study.
So
now
that
we've
got
an
idea
of
how
we
traditionally
go
about looking
this
problem,
let's
try
and
start
building
the Structural
Equation
Model.
So
to
transform
traditional
linear regression
into
the
form
of
a
Structural
Equation
Model,
we
need
to
do
a
few
things.
We
begin
by
moving
this
relationship
away from its graphical form,
into
this
visual
form.
Well,
we
can
see
that
we've
got
our
X
factor
in
the
rectangle
being
linked
to
the
other
rectangle
which
is
our
response.
And
between
these
two
rectangles,
they
are
linked
by
this
arrow.
Now,
a
single-
headed
arrow
just
means
a
relationship
going
one
way.
And then
Structural Equation Modeling,
it
is
possible
to
have
double-
headed
arrow
but
that's
not
particularly
important
in
this
example.
What
the
single-
headed
arrow
means
is
that
H_2O
composition
affects
the
density
of
the
tablet
but
the
density
of
the
tablet
does
not
affect
the H_2O
composition.
And
this
allows
us
in
this
instance,
fill this individual X
and
a
Y
perform linear
regression.
Now
the
confusing
part
about
this
graph
is
probably
the
one
in
the
triangle
at
the
top.
And
simply,
all
this
does,
and
this
is
usually
hidden
within
a
structural
equation
model,
is
it
allows
us
to
set
this
scale
for
our
entire
model.
And
we
can
see
that
through
how
this
Structural
Equation M
odel
actually
reports
the
data.
So
if
you
look
across
the
axis
between
the
one
in
the
triangle
and
the
Y
response, the
density tablet,
you'll
see
that
we
actually
get
a
number
on
that,
which
is
95.
903
which
we've
seen
before.
It's
actually
our
C
value
from our
linear
regression.
And
this
further
proves
that
this
is
the
part
of the
graph
that is used
in this
given
scale.
So
if
we
can
see
where
the
C
comes
from
and
that
directly
translates
where
does
the
m
coming
from.
Well,
the
m
is
actually
from
a
connection
at
the
bottom
there
between
the
percentage
to
a
composition
to
the
density
of
the
tablet.
And
we
can
see
that
it's
not
0.117,
the
exact
same
as
we
found.
Bear
in
mind
here
that
both
of
these
analysis
performed
in
two
different
platforms.
Now,
we
might
have
two
parts
of
our
Y,
it's in the
C equation
there.
But
this
schematic
is
in
the
form
of
three
sides.
And
so
you
might
be
wondering
what
is
that
final
side?
And
simply
put,
the
left
hand
side,
which
is
essentially the
number
one
and
%H2_O
Composition,
is
just
the
X
and the SEM.
Similar
to
how on
the
C
value,
which
gives
us
the
offset
of
the
Y
goes into the
C
graph,
is
the
Y-
intercept
of
the
graph
which
is
typically
important
and
quite
useful
statistically.
We
do
also
get
this
X value
given
to
us
by
the
Structural
Equation
Model,
which
isn't
particularly
important
because
we
don't
have
a
good
look
at
the
X-intercept
but
it's
interesting
that
the
analysis
can
provide
us
with this
additional
information
without
really
asking
for
it.
This
is
all
computed
automatically
like
I
say.
And
then typically,
there's
top
parts
hidden,
of course, just
to
give
us
context
as
to
what's
actually
happening
here.
And
so
looking
at
what
this
we've
actually
got
here,
we've
got
these
solid
lines
which
denote
that
something
is
statistically
significant.
And
between
the
H_2O
composition
and
the
density of the tablet,
we
have
this
dashed
line
which
actually
denotes
that
that
is
not
a
statistically
significant
correlation.
And
the
fact
the
correlation
is
very
low,
with 0.117
implies
it's
not
that
well
correlated
anyway.
So
if
we
just
took
this
at
place
value,
you
might
be
inclined
to
agree
with
our
initial
linear
regression
and
say
there's
no
effect
from
H_2O
composition
on
density
of
the
tablet.
But
since
we've
already
got
on data
in
the
form
of
the
Structural
Equation
Model,
let's
continue
with the
exploring to
day
and
see
if
we
can
cover
any
hidden
relationships.
So
we
know
that
this
entire
case
study
is
built
up
of
lots
of
X
factors,
lots
of
Y
responses,
and
we're
sure
that
we
simplify
it
down
to
just
one
factor
and
one
response.
So
let's
think
about
some
of
the
other
brackets
within
the
system
and
how
they
might
relate
to
this
response.
One
example
which
occurs
quite
a
lot
within
this
case
study
is
an
example
of
a
mediation
variable.
And
what
we
mean
by
a
mediation
variable,
is
it's
a
variable
which
can't
exactly
be
controlled
directly,
but
has
an
impact
on
our
final
response
while
still
being
affected
by
one
of
our
factors
that
we
can
control.
So
in
this
case,
we're
going
to
take
a
look
at
crushing strength
as
being
one
of
our
mediation
variables.
And the
reason
for
this
being
a
mediation
variable
is
because
the
crushing
strength
can
be
changed
in
this process.
And
it
does
have
an
effect
on
the
density
of
the
tablet.
But
the
crushing
strength
can
only
be
[inaudible 00:08:50]
certain
operational
range
depending
on
the
water
composition
within
the
tablet.
If
the
tablet's
too
dry,
we
need
to
change
the
crushing
strength
to
match
that
so
it
doesn't
completely
powder
the
tablet.
If
it's
too
moist,
it's
got
too
much
water
composition
in
there,
then
it
might
be
a
much
softer
crushing.
So
in
this
way,
you
see
that
this
is
a
variable
that
we
can't
change
directly
because
it
needs
to
be
affected
by
the
water
composition
but
it
is
important
somewhat
in
the
density
of
the
tablet
which
we'll
explore
then.
So
if
we
add
this
into
our
path
diagram
in
our
Structural
Equation
Model,
you
can
see
that
we
get
this
new
triangle
between
each
of
our
variables
with
the
number
one
this
time
now,
in
the
middle.
And
what
this
is
doing
in
the
context
of
the
case
study,
is
it's
saying
that
now
we
have
our
direct
response
which
is
the
connection
between
the
H_2O
composition
and
the
density
of
the
tablet.
And
we
also
have
our
indirect
response,
which
comes
from
the
connection
which
goes
all
the
way
around
the
diagram
through cr
ushing
strength
and
into
the
density
tablet.
Now,
what
this
means
is
this
is
actually
a
two-
part
equation.
So
not
only
do
we
have
an extra C
as before
when
there
was
one
X
variable,
we
now
also
have
another
variable
which
is
in
a
middle
part
of
the
equation.
So
because
of
that,
the
first
thing
that
we
notice
is
on
the
path
diagram,
the
connection
between
the
H
_2O
composition
and
the
density
of
the
tablet
is
0.054,
which
is
already
significantly
less
of
a
correlation
than
we
saw
last
time
when
we
just
included
the
one
variable.
And
this
is
because
the
rest
of
the
component
actually
comes
from
elsewhere
as
we're
exploring
here.
So
again,
we
can
see
that
that
connection
still
is
not
statistically
significant.
And
in
fact,
has
an
even
weaker
correlation
than
former.
Now,
if
we
look
at
our
other
connections,
say,
between
our
crushing
strength
and
density
of
the
tablet,
we're
seeing
a
statistically
significant
correlation
and
a
reasonably
correlated
one
at
0.593.
So
what
does
this
actually
mean
in
the
context
of
this
case
study?
Well,
it
means
a
couple
of
things
and
we
draw
a
couple
of
conclusions
from
this.
Firstly,
the
relationship
between
the
H_2O
composition
and
the
density of the
tablet
is
statistically
significant
which
isn't
something
we
knew
before
that
was
hidden
behind
the
fact
that
we
only
perform
the linear
regression.
And
the
second
thing
that
we've
learned
is
that
crushing
strength
and
the
density
of
the
tablet
are
correlated.
So
in
a
practical
sense,
this
means
that
we
can
conclude
if
we
want
to
control
the
density
of
our
tablet,
then
this
must
be
done
through
changing
the
H_2O
composition
but
only
as
a
means
to
alter
that
crushing
strength
to
the
desired
value.
And
so
if
we
actually
came
to
optimize
this
entire
situation
in
this
entire
case
study,
the
crushing
strength
is
where
we
want
to
pay
attention
to
and
anything
we
can
do
to
affect
that
which
isn't
something
we
can
change
with
just
a
dial.
So
in
this
way,
you
can
see
how
SEM
has
allowed
us
to
uncover
relationships
which
may
be
missed
in
traditional
modeling
methods.
And
in
turn,
it
provides
a
much
deeper
understanding
of
how
our
system
works.
So
next
time
you're
exploring
the
system,
I'd
encourage
you
to
consider
acquiring
SEM
to
help
you
better
understand
the
system
both
visually
and
more
in
depth.