Add-Ins outcross mapping

salihkafkas

I installed outcross linkage map analysis in Add-Ins in JMP Genomics software. I wrote also -RLANG in the first lane of sasv9.cfg file under C:\Program Files\SASHome\SASFoundation\9.4\nls\en\sasv9.cfg. However, I still get below error message when I run linkage analysis. 

I need your experience on it.

Best wishes

Salih

 

ERROR: The RLANG system option must be specified in the SAS configuration file or on the SAS invocation command line to enable the
submission of R language statements.
16632 if ^isOK then do;

Chris_Kirchberg

Hi Salih,

 

I have received some comments from development. Try this:

1. Completely shut down JMP Genomics and make sure JMP and SAS are not running in the background (Use Task Manager to find out)
2. Restart the computer to make sure any registry or system variables are now being recognized that might have been added by R installation
3. Open a SAS session (Start>SAS>SAS 9.4) and type the following in the Editor Window:
   1. proc options option=RLANG;

      run;

   2. Click on the button that looks like a running man at the top in the toolbar
4. Check in the Log and it should return a message in the log window
5. If it returns:
   1. "NORLANG   Do not support access to R language interfaces", you do not have permission to call R from the SAS system.
   2. "RLANG   Support access to R language interfaces", you can call R from the SAS system. Check your R_Home Environtment. See this link:

https://stackoverflow.com/questions/19525903/editing-sas-config-files-to-execute-r-making-sas-play-well-with-others

 

Let me know if you are still having problems.

 

Chris