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Sequence alignment map (SAM) files in JMP or JMPG?

Peter_Hersh

Does anyone have experience dealing with getting SAM files into JMP or JMP genomics?

Accepted answers

Chris_Kirchberg

Step by Step guide here

http://www.jmp.com/en_us/life-sciences/step-by-step-guides/analysis-next-gen-sequencing-data.html

Chris Kirchberg

JMP Technical Enablement Engineer

Worldwide Technical Enablement Team

SAS Institute, Inc.

Denver, CO

Tel: +1-919-531-9927<tel:%2B1-919-531-9927>

Mobile: +1-303-378-7419<tel:%2B1-303-378-7419>

E-mail: chris.kirchberg@jmp.com<mailto:chris.kirchberg@jmp.com>

Unsubscribe<http://www.sas.com/apps/jmp/email_preference.jsp>

All comments

Chris_Kirchberg

Yup. You have to use JMP Genomics. See these links:

http://www.jmp.com/support/downloads/life_sciences_documentation/wwhelp/wwhimpl/js/html/wwhelp.htm#href=ST_G_IM_0009.html

http://www.jmp.com/support/downloads/life_sciences_documentation/wwhelp/wwhimpl/js/html/wwhelp.htm#href=PR_G_IM_0045.html

Chris Kirchberg

JMP Technical Enablement Engineer

Worldwide Technical Enablement Team

SAS Institute, Inc.

Denver, CO

Tel: +1-919-531-9927<tel:%2B1-919-531-9927>

Mobile: +1-303-378-7419<tel:%2B1-303-378-7419>

E-mail: chris.kirchberg@jmp.com<mailto:chris.kirchberg@jmp.com>

Unsubscribe<http://www.sas.com/apps/jmp/email_preference.jsp>

Chris_Kirchberg

Step by Step guide here

http://www.jmp.com/en_us/life-sciences/step-by-step-guides/analysis-next-gen-sequencing-data.html

Chris Kirchberg

JMP Technical Enablement Engineer

Worldwide Technical Enablement Team

SAS Institute, Inc.

Denver, CO

Tel: +1-919-531-9927<tel:%2B1-919-531-9927>

Mobile: +1-303-378-7419<tel:%2B1-303-378-7419>

E-mail: chris.kirchberg@jmp.com<mailto:chris.kirchberg@jmp.com>

Unsubscribe<http://www.sas.com/apps/jmp/email_preference.jsp>

Peter_Hersh

Thanks Chris. I was hoping that was the answer.